VIII. COMMUNITY SERVICES AND MATERIALS
This
list is not necessarily complete. In many cases, a nominal cost-recovery fee is
charged. Check the WWW sites listed to be sure of current status and
procedures. Refer to MaizeGDB (http://www.maizegdb.org/cooperators.php)
and the Stock Center (http://w3.ag.uiuc.edu/maize-coop/Maize-Genome-Projects.html)
for updated links to maize projects which may provide community services or
materials not listed here.
I. A. Map coordinates for MAGI (Maize Assembled Genomic Island)
URL: http://magi.plantgenomics.iastate.edu/
I. B. IBM panel of stocks: materials and mapping computation
service
�
Seeds for IBM -94 and IBM-302 panels.
Maize Genetics Cooperation Stock Center
URL: http://www.maizegdb.org/cgi-bin/stockcatalog.cgi?id=1
�
DNA for the IBM-94 panel of stocks
Maize Mapping Project (Missouri). Nominal fee.
URL: http://www.maizemap.org/dna_kits.htm
�
Map positions, IBM-94 panel
CIMDE Community IBM Map Data Entry
Mapped by MapMaker software onto a framework with documentation, that includes public map scores)
With permission of authors, data are submitted to MaizeGDB
URL: www.maizemap.org/cimde.html
I. C. Radiation Hybrid Lines
Oat-maize lines.
URL: http://agronomy.coafes.umn.edu/cornpep/nsf/
II. Microarrays
II. A. Maize Oligonucleotide Array project.
57,452 70-mer oligo-nucleotides on 2 slides.
Also offers a hybridization service (June 2006 updated).
URL: http://www.maizearray.org/
II. B. Iowa State Plant Genomics
49, 280 oligo-nucleotides on 3 slides
http://www.plantgenomics.iastate.edu/maizechip/
III. Reverse genetics
III. A. TILLING
Point mutations from your sequence.
The Maize TILLING Project.
Till et al. Genome Research (2003) 13: 524-530
URL: http://genome.purdue.edu/maizetilling/
III. B. MU insertions from your sequence
MTM Maize Targeted Mutagenesis Database
URL:
http://mtm.cshl.edu/
IV. Clones
IV. A. Public cDNA and BAC clones, libraries, filters
Arizona Genomics Institute.
This resource provides most of the clones, BAC libraries and BAC filters that are in the public domain and at a nominal cost.
URL: http://www.genome.arizona.edu/orders/