Database for loci mapped in TxCM and COxTx RI families
--B. Burr, F.A. Burr and E.C. Matz
Ed Coe has asked us to reproduce our laboratory database that describes everything we know about the loci mapped in the recombinant inbred families. Because this database was never intended for publication, browsers will find it both idiosyncratic and cryptic. The fields are:
1) the name of the locus
2) estimated map position
| LOCUS | POS. | INBRED LINE | ENZYME | & MORPH SIZE | REMARKS | |
| CM37 | T232 | Tx303 | CO159 | |||
| a1 | 3L149 | Bgl2 ~9, Hin3 11 | Bgl2 ~16, Hin3 7.3 | Bgl2 ~6 | Bgl2 ~16 | probe is pAMu2 from Z. Schwarz-Sommer. 600 bp. |
| abp1 | 3L068 | Auxin binding protein;data from Marian Lobler,probe = G900,saw SstI polymorphism. 10/18/90 combined with pKlamb+ of A Jones | ||||
| aco1 | 4S059 | 1 | 4 | isozyme | ||
| acp1 | 9L070 | 2 | 4 | 4 | 3 | isozyme |
| acp4 | 1L177 | 5 | 4 | 4 | 5 | isozyme |
| act1 | 8L025 | Bgl2 6.0 | 3.9 | probe is pMac1 from R. Meagher | ||
| adh1 | 1L128 | Bam 12 | Bam 16, 7.1 | 4 | 6 | probe is pH2.3 from M. Freeling, isozyme in 2nd family |
| adh2 | 4S046 | Hin3 11kb | 5.4 | Eco 7.2, Bam ~6 | Eco 13.5 Bam ~5.5 | probe is pZML841 from M. Sachs |
| agp1 | 6L109 | BamHI 18.2 kb | 8.3 kb | 2.2 kb EcoRI cDNA clone.Embryo specific counterpart to sh2 from M.J. Giroux | ||
| agp2 | 2L106 | EcoRI~24.5 kb | 8.5 kb | EcoRI 13.5 kb | 8.9 kb | 1.8 kb EcoRI cDNA.Embryo specific counterpart to bt2.From M.J. Giroux. |
| agr-c94 | 4S021 | Bam 1.5 | Bam 5.8 | Bam 1.5 | Bam 8.3 | cDNA probe from Agrigenetics; 0.83 kb fragment from a Pst digest, also a .35kb. |
| agr-r115 | 4S005 | Bgl2 6.8 | 7.8 | Bgl2 5.4 | 10.5 | Blots probed by Yu Ma with a cDNA probe. |
| als1 | 4L087 | Hin3 16-17 | Hin3 2.5 | acetolactate pyruvate-lyase from tobacco probed by N.S. Shepherd, 1st band | ||
| als2 | 5L049 | Hin3 9.5 | Hin3 3 | 2nd band probed with tobacco als by n.S. Shepherd | ||
| amp3 | 5S038 | 4 | 3 | 4 | 3 | isozyme |
| ars1 | 2S051 | BglII 8.0 kb (18.2 + 16.3 kb) | 19.6 kb (10.6 kb) | BglII 8.0 kb (18 + 4.4 kb) | 8.4 kb (5.45 + 4.7 kb) | 800 bp PstI from Paul Sisco; Eileen thinks 680 bp.Should map close to b1. 10/16/90 |
| b1 | 2S049 | + | - | - | - | morphological |
| bnl1.297 | 3L126 | Bam ~4.5 | ~5.5 | Bam ~10 | ~15,7 | same as 1.80, O.95 Eco cDNA |
| bnl1.326 | 1S016 | Eco ~6.5 | ~7.5 | 0.54 Eco cDNA | ||
| bnl1.380 | 5S028 | Eco ~4 | ~3.5 | Eco ~4 | ~20 | 0.32 Eco cDNA |
| bnl1.45 | 8L015 | Eco ~6.5 | ~5.5 | Eco ~6.5 | ~5.5 | 0.44 Eco cDNA |
| bnl1.556 | 1S052 | Eco ~13 | ~16 | Eco ~18 | ~15 | LINKED WITH 5.59, 0.44 Eco cDNA |
| bnl1.80 | 3L126 | Bam ~4.5 | ~6 | Bam ~12 | ~16 | same as 1.297 |
| bnl2.369 | 8L032 | Eco >25 | ~14 | Bgl2 ~14 | 6.6 | 0.70 kb Eco cDNA |
| bnl3.02 | 10S-07 | Bam ~16 | ~6.5 | Bam ~24 | ~10 | Same as 3.04 |
| bnl3.03 | 6L067 | Bam 15 | 9 | Bgl1 >25, 15.5 | Bgl1 13, 4.4 | 2.5kb PstI genomic |
| bnl3.04 | 10S-07 | Bam 22, 6.6 | ~10, 6 | Bam 22, 6.6 | ~10. 6 | LINKED WITH 5.40 AND 10.17 IN FIRST FAMILY; 2.2 kb Pst Genomic |
| bnl3.06 | 9S053 | Bam ~5 | ~9, 12 | 2.35 kb Pst Genomic | ||
| bnl3.18 | 3L120 | Bgl2 ~6 | ~8 | 2.1 kb Pst Genomic | ||
| bnl4.24 | 7L054 | Bam ~6.8 | ~8 | Hinc2 6.1 | Hinc2 6.4 | 2.35 kb Pst genomic |
| bnl4.36 | 5S035 | Bam ~17,15 | ~20 | Bam ~16 | ~14 | 2.3 kb Pst genomic |
| bnl5.02 | 5S013 | Eco ~24 | ~8 | Eco ~10 | ~8 | 2.2 kb Pst genomic, NPI finds second locus on 1L near centromere. |
| bnl5.04 | 9L074 | Bam ~18,7 | ~3 | Bam ~7,(12) | ~13,(9) | 2.1 kb Pst genomic |
| bnl5.09 | 9L106 | Bgl2 ~6.6 | ~16 | Eco ~2 | ~18 | 2.3 kb Pst genomic |
| bnl5.10 | 9L064 | Bgl2 ~5 | ~16 | 2.4 kb Pst genomic | ||
| bnl5.14 | 3L097 | Eco 18 | Eco 5.0 | 2.5 kb Pst Genomic | ||
| bnl5.21A | 7L065 | Bgl2 5.4 | Bgl2 11.5 | Bgl2 6.2 | Bgl2 11.5 | 2.2 kb Pst Genomic, 1st band probed with 5.21 |
| bnl5.21B | 2L139 | Bgl2 9.0 | Bgl2 7.8 | Bgl2 8.7 | Bgl2 8.2 | 2.2 kb Pst genomic, 2nd band probed with 5.21 |
| bnl5.24 | 5L112 | Bam ~12 | ~20 | Bam ~18,7 | ~15,9 | 2.5 kb Pst genomic; B-A possibly 5L |
| bnl5.27 | 5S018 | Eco 9.0 | Eco 7.5 | 2.0 kb Pst genomic | ||
| bnl5.33 | 3L123 | Bgl2 6.6 | Bgl2 5.7 | Bgl2 5.4 | Bgl2 5.8, 3.0 | 2.1 kb Pst genomic |
| bnl5.37 | 3L084 | Bam ~9 | 6.6 | Bam ~18 and 6.6 | ~12 | 2.3 kb Pst genomic |
| bnl5.40 | 5L067 | Bam ~4.5 | ~5.5 | Bgl2 >25 | ~22 | LINKED WITH 10.12L; 2.25 kb Pst genomic |
| bnl5.46 | 4S054 | Bam ~18 | ~8.5 | 2.25 kb Pst genomic | ||
| bnl5.47 | 6L088 | Bgl1 1.7 | Bgl1 4.0 | Bam ~18, 4.8 | ~8, 6 | 2.25 kb Pst genomic |
| bnl5.59 | 1L062 | Bam ~4.2 | ~4.0, 1.0 | Bam ~4.0 | ~4.2 | LINKED WITH 1.556; 2.25 kb Pst genomic; B-A not 1L, 1S, 4L, 7L, 9L, 6L false + |
| bnl5.61A | 7L066 | Bgl2 6.6, 5.5 | Bgl2 12 | Bgl2 6.4 | Bgl2 11.5 | 2.2 kb Pst genomic, 1st band probed with 5.61 |
| bnl5.61B | 2L143 | Bgl2 9.4 | Bgl2 7.7 | Bgl2 8.9 | Bgl2 8.2 | 2.2 kb Pst genomic, 2nd band probed with 5.61 |
| bnl5.62 | 1S-31 | Bam ~9. 6.8 | ~10 | Bam ~24, 10 | ~9.5, 7 | 2.1 kb Pst genomic; NPI finds a second locus on 2S between lg and b. |
| bnl5.67 | 4L141 | Bgl2 ~1.8 | ~2.6 | Bgl21.8 | ~2.6 | LINKED WITH SSU. 10.05, 7.65; 2.5 kb Pst genomic; B-A positive for 4L, not 9L |
| bnl5.71 | 5L053 | Bgl2 ~20 | ~5 | Bam ~18 | ~4.5, 5.5 | 2.5 kb Pst genomic |
| bnl6.06 | 3L069 | Bam ~6.5 | ~9.5,4.5 | Bam ~9.5,4.5 | ~3 | 2.4 kb Pst genomic |
| bnl6.10 | 5S015 | Eco ~25 | ~15 | 2.1 kb Pst genomic | ||
| bnl6.16 | 3L115 | Bam ~5.5,(6.9) | ~6.8 | Bam ~6.8 | ~8,(6.6) | 2.45 kb Pst genomic |
| bnl6.20 | 2L151 | Bam ~6 | ~10 | Bam ~9, 4.5 | ~10 | Tightly linked w/ NPI298; 2.5 kb Pst genomic |
| bnl6.22 | 5S026 | Eco ~20 | ~7 | 2.0 kb Pst genomic | ||
| bnl6.25 | 5S-25 | Bam ~4.4 | ~4.8 | Bam ~4.5 | ~12 | linked with 8.33; 2.25 kb Pst Genomic; B-A not 1L, 3L, 7L, 9L, 10S, possibly 2L |
| bnl6.27 | 7L056 | Bgl1 20, >25 | Bgl1 18.5 | Bgl1 17.5 | Bgl1 >25 | 2.2 kb Pst genomic |
| bnl6.29 | 6S001 | Eco 21 | 14 | 2.3kb PstI genomic; this clone originally called 6.24 | ||
| bnl6.32 | 1L172 | Bam two lower | ~18 | Bam 4.4 | 18 | 2.25 kb Pst genomic |
| bnl7.08 | 8L021 | Bgl2 4.5 | 25 | Bgl2 25 | 4.5 | 2.3kb PstI genomic; upon regrowing this plasmid found a second 2.4kb insert (?) |
| bnl7.13 | 9L075 | Bgl2 ~5.5 | ~5.0 | Bgl2 ~7 | ~5 | 2.1 kb Pst genomic |
| bnl7.20L | 4L078 | Eco 14 | 3.2, 2.3 | Eco 4.1, 21.5 | 9.2, 3.1 | 2.4 kb Pst genomic, a higher Pst band in this clone was not a good probe |
| bnl7.21 | 1S042 | Bam ~7 | ~2.4 | 2.5 kb Pst genomic | ||
| bnl7.24A | 9L061 | Bam 3.2 | Bam 7.8 | 2.1 kb Pst genomic, 1st band probed with 7.24 | ||
| bnl7.24B | 5S-16 | Bam 2.3 | Bam ? | 2.1 kb Pst genomic, 2nd band probed with 7.24 | ||
| bnl7.25 | 1L138 | Eco ~13 | ~7 | Eco ~7.5 | ~13 | 2.5 kb Pst genomic |
| bnl7.26 | 3L165 | Eco 17 | 20 | 2.4 kb Pst genomic | ||
| bnl7.28 | 6L009 | Bam 20 | 8.9, 3.3 | Bam 8.8 | 11.7 | 2.3 kb Pst genomic |
| bnl7.43 | 5S032 | Bam 6.7 | ~18 | Eco ~18 | ~6 | 2.4 kb Pst genomic |
| bnl7.49 | 10L080 | Bam ~20 | ~16 | Bam ~21(doublet) | ~18 | TIGHTLY LINKED WITH 17.02; 2.1 kb Pst genomic; B-A not 4L, not 6L |
| bnl7.50 | 9L091 | Bam 22 | 3.6 | Bam 5.8 | 22 | 2.3 kb Pst genomic |
| bnl7.56 | 5S010 | Bam ~25 | ~9.5 | Bam ~9.5 | ~25 | 2.2 kb Pst genomic |
| bnl7.57 | 9L110 | Bam 7.7 | Bam 6.0 | Bam 7.1 | Bam 6.5 | 2.5 kb Pst genomic |
| bnl7.61 | 7L077 | Bam ~6.5 | ~8.5 | Bam ~20 | ~9 | 1.8 kb Pst genomic |
| bnl7.65 | 4L106 | Bam ~7 | ~12 | Bam ~15 | ~8 | LINKED WITH SSU, 10.05, 5.67; 2.2 kb Pst genomic; B-A probably 4L |
| bnl7.71 | 5S039 | Bam >30 | 22 | Bam ~15 | ~20 | 2.55 kb Pst genomic; B-A not 2L, 3L, 9L |
| bnl8.01 | 3L095 | Bam ~20 | ~5 | Bam ~6 | ~12 | 2.4 kb Pst genomic |
| bnl8.04 | 2S070 | Bgl2 ~23 | ~25,20 | TIGHTLY LINKED WITH 12.36; 2.5 kb Pst genomic | ||
| bnl8.05 | 1S-28 | Bgl2 ~7.2,7.0 | ~6.8 | Bgl2 ~6.8,3.0 | ~7.2,6.6 | 2.3 kb Pst genomic; linked w/ 5.62; B-A 1S confirmed, not 4S, 7L, 8L, 10L |
| bnl8.06A | 8L017 | EcoRI4.7 kb | 13.0 kb | EcoRI 14.0 kb | 18.5 kb | 2.25 kb Pst I genomic |
| bnl8.06B | 6L092 | EcoRI 11.5 kb | 2.9 kb | EcoRI | Minor band probed with 8.06; polymorphism in first family only. | |
| bnl8.08 | 1L146 | BamHI 2.7 kb | 3.1 kb | 2.15 kb Pst I genomic.Minor band.2F doesn't show parental polymorphism. | ||
| bnl8.10 | 1L112 | Bgl1 2.5 | Bgl1 7.7 | Eco ~18 | ~15 | 2.5 kb Pst genomic |
| bnl8.15 | 3S010 | Bgl ~5.5 | ~5 | Hinc2 18.5 | Hinc2 10.0 | LINKED WITH E8; 2.1 kb Pst genomic |
| bnl8.17 | 9L086 | Bam ~14 | ~20 | Bam ~7 | ~20 | 2.2 kb Pst genomic |
| bnl8.21 | 7L079 | Bam 10 | 23 | Bam (20), 8 | 5 | 2.2 kb Pst genomic |
| bnl8.23 | 4L156 | Eco 7.4 | 7.9 | Eco 9.0 | 4.5 | 2.5kb PstI genomic |
| bnl8.26 | 8L037 | Eco ~10 | ~9,5.5 | 2.4 kb Pst genomic | ||
| bnl8.29A | 1L152 | Hin3 11 | Hin3 14 | Eco ~4, Hin3 16 | Eco ~9, Hin3 12.5 | 2.3 kb Pst genomic |
| bnl8.29B | 5S-20 | Hin3 6.5, 3.3 | Hin3 8.0 | Hin3 12 | Hin3 3.0 | 2.3 kb genomic, 2nd band probed with 8.29 |
| bnl8.32 | 7L070 | Bam 10 | 2.3 | Bam 10 | 2.4 | 2.4 kb Pst genomic |
| bnl8.33 | 5S-38 | Bam 4.4 | ~5.5, 4.0 | Bam ~4.8 | 4.3 | linked with 6.25; 2.5kb PstI genomic |
| bnl8.35 | 3S054 | Bgl2 23 | 4.5 | Hinc2 18 | Hinc2 2.0 | 2.2 kb Pst genomic |
| bnl8.37 | 7L078 | Bgl2 ~25 | ~18 | Bgl2 ~20 | ~15 | 2.1 kb Pst genomic |
| bnl8.39 | 7L087 | Hin3 11.6 | Hin3 22 | Bam 4.4, 2.5 | ~5 | 2.2kb PstI genomic |
| bnl8.44 | 7L122 | Bam 6.7 | ~15, 8 | Bam ~10 | ~15, 7 | TIGHTLY LINKED WITH 16.06; 2.2 kb Pst genomic |
| bnl8.45 | 2S010 | Bam ~7.5 | ~6 | Bam ~7 | ~7.5 | linked with NPI 239; 2.1 kb Pst genomic |
| bnl9.07 | 9S006 | BamHI 17.2 kb | 21.5 kb | 2.4 kb PstI genomic | ||
| bnl9.08 | 8L017 | Bam ~15,8 | ~7,6 | Bam ~18,9 | ~25,17 | 2.2 kb Pst genomic. Hybridize at 50c. |
| bnl9.11 | 8S-19 | Bam 22 | 10 | Eco ~25 | ~20,16 | linked with 15.07, 13.05; 2.4 kb Pst genomic; B-A not 4L |
| bnl9.13 | 1S-01 | BglII 7.1 | 2.1 | 2.0 kb PstI genomic | ||
| bnl9.44L | 8L012 | Bgl2 ~10 | ~12 | Bgl2 ~12, 9 | ~10 | 0.5 kb Pst genomic |
| bnl10.05 | 4L104 | Eco ~15, 7 | ~12 | Eco ~18 | ~16 | LINKED WITH SSU, 7.65, 5.67; 2.5 Pst genomic; B-A probably 4L, not 3L, not 10S |
| bnl10.06 | 5S030 | Eco ~6 | ~18 | Eco ~18 | ~6. (18) | 2.3 Pst genomic |
| bnl10.12L | 5L058 | Eco ~9.5 | ~15 | Bgl2 ~10 | ~4.8 | 2.2 kb PstI genomic |
| bnl10.12U | 8L087 | Bam ~4.6 | ~9.2 | Bgl2 ~9 | ~13 | 2.5kb PstI genomic; TIGHTLY LINKED WITH 10.24 IN SECOND FAMILY; B-A not 4L |
| bnl10.13 | 10L059 | Bam 2.9 | 4.4 | Eco 9.2 | 22 | 2.2kb PstI genomic |
| bnl10.17 | 10S-17 | Eco ~8.5 | ~9 | Bcl 5.9 | 5.6 | LINKED WITH 3.02 AND 3.04; 2.6 Pst genomic |
| bnl10.24A | 3L089 | Bgl2 ~8.5, Bam >25 | Bgl2 ~5.5, Bam 19 | Bam 23 | Bam >25 | 29 Jan `87, poor; 2.2 Pst genomic (same as 10.24B) |
| bnl10.24B | 8L081 | Bam 5.1, 4.5 | Bam 6.3 | Eco ~3, Bam 6.8 | Eco~2.9, 1.0, BAm 4.6 | 9 Dec `86; TIGHTLY LINKED WITH 10.12U IN 2ND; 2.2 Pst genomic (same as 10.24A) |
| bnl10.38 | 1S014 | Eco ~5,3.5 | ~18 | 2.3kb PstI genomic; linked with 1.326 | ||
| bnl10.39 | 8L008 | Eco ~25 | ~16 | 2.0 Pst Genomic | ||
| bnl10.42 | 2S069 | Bgl2 ~3 | ~6(doublet) | tightly linked with 12.36; 2.6 Pst genomic | ||
| bnl12.06 | 1S031 | Bam lower | upper | Bam >25, 20 | 24, 19 | 2.0 Pst genomic |
| bnl12.09 | 2L082 | Bam 4.1, 1.5 | 2.0 | 1.3kb Pst genomic | ||
| bnl12.30A | 8L048 | Eco 9.9 | 15.3 | Eco 15.3 | 6.3 | 1.6kb PstI genomic |
| bnl12.30B | 3L150 | EcoRI | Data from Paul Sisco. 12/14/90 | |||
| bnl12.36 | 2S066 | Eco ~13 | ~20 | Eco ~4 | ~7 | LINKED WITH 10.42 AND 8.44; 2.1 Pst genomic |
| bnl13.05A | 8S-34 | BglII 2.95 kb + 950 bp | 1.33 kb (19.7 kb) | Bam 22.5 kb | 17.5 kb | 1.3kb PstI genomic; A second locus on 3L; B-A not 4S, 8L, 10L; 1F redone 10/16/90 |
| bnl13.05B | 3S063 | BglII 13.5 kb | 17.5 kb | Eco 23 kb | 7.8 kb | 2nd band probed with 13.05. 2nd family data from 20 Jan blot(Ben's); 1F redone 10/16/90 |
| bnl13.05C | 8L013 | BglII 21.5 kb | 22.5 kb | 10/17/90 | ||
| bnl13.24 | 7L059 | Bam ~10 | ~20 | Bam ~20 | ~18 | 1.45kb Pst Genomic |
| bnl14.07 | 7L076 | Eco ~20 | ~6.8 | 1.2kb Pst genomic | ||
| bnl14.26 | 9L104 | Bam ~15 | 12 | Bam 9.5 | ~16 | same as 14.28 |
| bnl14.28 | 9L104 | Bam ~14 | ~10 | Bam 7 | ~15 | 1.55kb Pst genomic; B-A on 9L, not on 2L, 4L, 10S |
| bnl14.34 | 7L076 | Eco ~20 | ~6.6 | same as 14.07 | ||
| bnl15.07 | 4L163 | Bam 6.5 | 4.8 | Bam 4.5, 2.4 | 6.8 | Linked w/ 8.23;Loosely linked with 9.11, 13.03; B-A not 2L;1.95kb Pst genomic; 1/14/91 |
| bnl15.18 | 1L123 | Bam 9.5 | 3 | Bam 7.5 | 2.8 | 1.4 kb Pst genomic |
| bnl15.20 | 3L112 | Eco ~13 | ~8 | Bam ~9 | ~7, 5 | 1.1 kb Pst genomic |
| bnl15.21 | 7L046 | Bam ~22, (16) | ~18, 12 | Bam ~25, 30 | ~15 | 1.25 kb Pst genomic; B-A possibly 7L |
| bnl15.27 | 4L073 | Bam 9.3 | 11.5 | 1.3kb Pst genomic; tightly linked with 15.45; B-A not 7L | ||
| bnl15.37 | 6L078 | Bam ~25, (20) | ~14 | Bam ~18, 15, 12 | ~22 | 1.15 kb Pst genomic |
| bnl15.40 | 7S028 | Bam ~10, 7, 5.5 | ~15 | Bam ~6 | ~6.5 | 1.95 kb Pst Genomic |
| bnl15.45 | 4L073 | Bam 15.5, 2.7 | 15.5. 14 | Bam ~13, 8 | ~2.8 | 1.3 kb Pst genomic; B-A not uncovered by 4L |
| bnl16.06 | 7L114 | Bam ~22 | ~9 | Bam ~17 | 9.5 | LINKED WITH 8.44; 1.8 kb Pst genomic; B-A positive for 6L |
| bnl17.01 | 8L055 | Hin3 3.0 | Hin3 2.2 | Bgl2 15 | 8.6 | This is a second band probed with the A1 clone pAMu2 |
| bnl17.02 | 10L065 | Bgl2 ~6 | ~1.8 | Bgl2 ~4 | ~1.8 | random genomic from B. Lowe and P. Chomet, 1.2 kb Eco |
| bnl17.03 | 2L166 | Eco 9.3 | 5.3 | Eco 3.3, Hin3 5.1 | Eco 5.1, Hin3 5.7 | This is a second band detected with the C2 cDNA probe; it may be Whp1 |
| bnl17.04 | 1L124 | Eco 8, 4 | 7 | Eco 8, 7 | 3, 2,5 | pUC9 -1 alpha tubulin probe from D.P. Weeks |
| bnl17.05 | 4L115 | Bam 2.1 | ~1.8 | Bam ~1.8 | 2.1 | LINKED WITH 10.05, 7.65, 5.67; SSU probe is pC1 from R. Broglie |
| bnl17.06 | 1L099 | Bam ~9 | ~12.5 | Bam ~20, 15 | ~9 | probe is p7.6-1, random genomic from K.C. Cone, 2 kb Acc, subcloned with Sal end |
| bnl17.07 | 10L060 | Bam 8.4 | 4.2 | Bam 4.2 | 12.4 | probe is 1.85kb subgenomic in pBF245; B-A 10L confirmed |
| bnl17.09 | 4S069 | Hinc2 9.0 | Hinc2 5.8 | This was called umc59, but is an unknown probe. | ||
| bnl17.12 | 6L095 | EcoRI 4.9 kb | 5.7 kb | EcoRI 5.6 kb | 4.8 kb | cDNA subclone pBF263B (9.1.1L), 0.7 kb Eco insert. |
| bnl17.13A | 7S022 | BglII 20 kb + 11 kb | ~25 kb + 9.9 kb + 7.2 kb | 550 bp EcoRI insert. cDNA subclone pBF263F. Lambda clone 11.2.1AL. 10/16/90 | ||
| bnl17.13B | 4S035 | BglII 5.8 kb | 8.8 kb + 5.3 kb | 550 bp EcoRI insert. cDNA subclone pBF263F. Lambda clone 11.2.1AL. 10/16/90 | ||
| bnl17.13C | 4S063 | BglII no band | 7.6 kb | 550 bp EcoRI insert. cDNA subclone pBF263F. Lambda clone 11.2.1A. 10/16/90 | ||
| bnl17.14 | 2L189 | BglII 6.9 kb | 6.0 kb | BamHI 18.2 kb | 5.9 kb | 1.25 kb PstI, Received as pio200075, but detected no linkage with 10S. |
| bnl17.15 | 1L082 | BglII 5.4 kb | 6.7 kb | BglII 6.8 kb | 11.5 kb | 1.65 kb Eco. Detected w/ bt2 cDNA from Hannah = adp1? 12/14/90 |
| bnl17.16 | 8L019 | BglII 2.0 kb | No band | Minor band probed by bt2. May be same as adp4. 1/22/91 | ||
| bt1 | 5S042 | BglII 9.8 kb | 6.8 & 4.85 kb | BglII 10 kb | 23.1 kb | 1.85 kb EcoRI insert from cDNA clone from Tom Sullivan. 12/14/90 |
| bt2 | 4S067 | BglII 8.2 kb | 5.6 kb | 1.65 kb EcoRI. cDNA clone from Curt Hannah. 12/14/90 | ||
| bz1 | 9S031 | Eco ~5 | Eco ~21 | Eco | Eco | probe is pMBzPA from D. Furtek. Hybridize at 50c. |
| bz2 | 1L106 | Bgl2 8.6 | Bgl2 7.5 | Bgl2 7.5 | Bgl2 8.6 | probe is pP300 from V. Walbot |
| c1 | 9S026 | Bam 9.9 | Bam 8.8 | probe pEco1.0 from K.C. Cone | ||
| c2 | 4L117 | Eco 10.2 | 15 | Hin3 20 | Hin3 9.2 | Probe is 1.5kb maize cDNA clone from U. Wienand |
| dia1 | 2L109 | 8 | 12 | isozyme | ||
| e8 | 3S020 | 4.5 | 4 | 4 | 5 | isozyme |
| enp1 | 6L016 | 6 | 10 | isozyme | ||
| gln1 | 10L095 | Bam 15.5 | 9.6 | Bam9.4 | 4.8 | Probe is glutamine synthetase clone GS6.15:PBS+, 1350bp Eco insert from Messing. |
| glu1 | 10S026 | 7 | 2 | 7 | 6 | isozyme |
| got2 | 5L096 | 2 | 4 | isozyme | ||
| hcf106 | 2L092 | Data from Rob Martienssen | ||||
| hex2 | 6L062 | 1 | 2 | 2 | 1 | isozyme |
| idh1 | 8L063 | 6 | 4 | isozyme | ||
| idh2 | 6L105 | 6 | 4 | 6 | 4 | isozyme |
| mah9 | 5S004 | EcoRI 8.9 kb | 5.9 kb | EcoRI 4.8 kb + 4.4 kb | 6.0 kb | 300 bp Pst cDNA frag. from M. Pages; 10/16/90 |
| mdh1 | 8L002 | 6 | 1 | isozyme | ||
| mdh2 | 6L107 | 3.5 | 6 | 3 | 6 | isozyme |
| mdh3 | 3L146 | 16 | 18 | 18 | 16 | isozyme |
| mdh4 | 1L097 | 14.5 | 12 | isozyme | ||
| mdh5 | 5S017 | N | 15 | isozyme | ||
| me2 | 6L076 | NADP-dependent malic enzyme, cytosolic; data of Beverly Rothermel (Yale). | ||||
| mgs1 | 10L032 | BamHI 5.6 kb | 5.4 kb | BamHI 5.0 kb | 5.5 kb | 450 bp EcoRI + HindIII; this is zmc13 from Mascarenhas; Pl.Cell 1:173(1989). |
| mgs2 | 4L127 | EcoRI 5.95 kb | 8.0kb | EcoRI 5.95 kb | 3.75 kb | Pectinalyase cDNA clone zmc58 from Mascarenhas.Pollen specific. |
| nabp1 | 7S026 | Hin3 ~7.6kb | 8.8 | Data of Bill Cook, Missouri; nucleic acid binding protein, on top of pio200690B | ||
| ncr-nrA | 1L076 | HindIII | EcoRI | Data from Paul Sisco. 12/14/90 | ||
| ncr-nrB | 4L074 | HindIII | EcoRI | Data from Paul Sisco. 12/14/90 | ||
| ncrb32c3A | 8L023 | Data from Paul Sisco.B32 endosperm protein family probe from B. Boston. | ||||
| ncrb32c3B | 7L083 | Data from Paul Sisco.B32 endosperm protein family probe from B. Boston. | ||||
| ncrb70 | 5S031 | Data from Paul Sisco.Probe from B. Boston. | ||||
| niu1 | 8L010 | Eco 2.3 | 2.7 | Eco 3.05 | 2.25 | Probe was 550 bp SalI-SphI fragment from Bs1; data from Rick Johns. |
| niu2 | 5S008 | Eco 2.3 | 2.7 | Eco 3.05 | 2.25 | Probe is 550 bp Sal-Sph fragment from Bs1; data from Rick Johns. |
| nor | 6S-06 | Sst 6.6 | Sst 11.5 | Sst 4.2 | Sst- | probe is pBF243 |
| npi97 | 1S-13 | Bgl2 12.3 | Bgl22.0 | Bcl1 3.0 | Bcl1 8.0 | 1.1 kb HindIII fragment |
| npi98 | 6L036 | Eco 2.9 | Eco 2.3 | Eco 2.85 | Eco 2.2 | 1.2 kb insert cut out w/ H3; npi98 is minor band & npi225 is major band w/ probe. 1/14/91 |
| npi105 | 10S027 | EcoRI 9.1 kb | 7.6 kb | BglII 12.2 kb | 13.4 kb | 780 bp PstI.This is most proximal probe on 10S. |
| npi109 | 1S-04 | |||||
| npi113 | 7L111 | Bgl2 19.5 | 12.5 | Bgl2 22 | 19, 8 | 1.4 kb Hind III insert. |
| npi114 | 8S-55 | HindIII | EcoRV | Data from Paul Sisco. 12/14/90 | ||
| npi118 | 2L149 | Bgl2 7.7 | 17 | Bgl2 12 | 5.1 | Second locus probed with npi113. |
| npi202 | 3L065 | Data from Paul Sisco; near vp1. | ||||
| npi208 | 4L098 | Hin3 21.5, 12 | Hin3 15.5, 6.5 | 0.91 kb fragment from a Pst+H3 digest; there is also a 0.75 kb frag. | ||
| npi209A | 9L113 | Bgl2 5.9 | Bgl2 7.5 | Eco 5.2 | Eco6.0 | 1.6 kb Hind III insert; 1st locus probed by npi209 |
| npi209B | 1S-05 | Bgl2 20 | Bgl2 13 | Eco 8.6 | Eco 14.5 | 2nd band probed by npi209 |
| npi220 | 8S-48 | Bgl2 4.7 | ~13 | Bgl1 6.9 | 7.7 | <500 bp, HindIII + EcoRI |
| npi223 | 6L054 | Bgl2 4.2 | 3.4 | Bgl2 4.5 | 3.5 | 1.58 kb Hind III insert |
| npi224A | 7S024 | EcoRI no allele | 20.5 kb | Probable Transposable Element. 10/16/90 | ||
| npi224B | 8L094 | EcoRI no allele | 15 kb | Probable Transposable Element. 10/16/90 | ||
| npi224G | 1L074 | BamHI no allele | 20 kb | Probable Transposable Element. 10/16/90 | ||
| npi224I | 3S032 | BamHI no allele | 7.9 kb | Probable Transposable Element. 10/16/90 | ||
| npi225 | 1L127 | Eco 6.4 | Eco 11.5, 8.8 | Eco 5.6 | Eco 7.0 | Major band probed with npi98, 1.2 kb H3 insert. 1/14/91 |
| npi235 | 6S004 | Hin3 9.5 | Eco 18 | 24 | 0.71 kb Pst I insert | |
| npi236 | 1L084 | Eco 17kb | Eco 22kb | 0.62 kb Pst insert. | ||
| npi238 | 1L147 | EcoRI | EcoRV | data from Paul Sisco. 12/14/90 | ||
| npi239 | 2S005 | Bam 8.2 | 6.0 | Eco 19.5 | 5.4 | B-A 2S confirmed.0.86 kb Pst I insert. |
| npi242 | 2L097 | BglII 23.1 kb | 20.5 kb | EcoRI 12.0 kb | 14.2 kb | 1.15 kb PstI |
| npi253 | 9S016 | Eco 6.0 | 19.5 | Bam 4.8, 3.8 | 5.2 | 0.58 kb Pst I insert. |
| npi253B | 4L097 | BamHI | EcoRV | Data from Paul Sisco. 12/14/90 | ||
| npi253C | 5L084 | BamHI | Data from Paul Sisco. 12/14/90 | |||
| npi253D | 6L060 | BamHI | Data from Paul Sisco. 12/14/90 | |||
| npi254 | 2S020 | EcoRI | HindIII | Data from Paul Sisco. 12/14/90 | ||
| npi263 | 7L068 | Data from Paul Sisco. 12/14/90 | ||||
| npi264 | 10L038 | Bam 9.1 | 16 | Bam 8.4, 7.5 | 5.6 | 0.77 kb insert. |
| npi268 | 8L084 | Bam 7.1 | 5.5 | Bam 11 | 5.6 | 11 kb Bam is seg`g in COXTx, our version of Tx303 has a 7.2kb band; .71 Kb Pst |
| npi269A | 2S060 | Eco 10.6 | 17.5 | Bam 21.5, Hinc2 19 | Bam 14, Hinc2 7.0 | One of two loci recognized by npi269.PstI 1.0 kb |
| npi269B | 10L049 | Eco ~25 | 3.3 | This is a second band recognized by the probe used for NPI269A.PstI 1.0 kb. | ||
| npi271 | 2L094 | Hin3 7.8, 4.8 | Hin3 7.2, 3.7 | Bgl2 10 | 2.8 | B-A not uncovered on 2S.0.62 kb Pst I insert. |
| npi273 | 1S-02 | BamHI 14.0 kb | 13.0 kb | BglII 19.5 kb | 16.0 kb | 1.4 kb EcoRI + HindIII |
| npi283 | 7L061 | Bgl2 16 | 9.4 | Bgl2 16 | 13.7 | B-A 6L confirmed.0.98 kb Pst I insert. |
| npi285 | 10S006 | Eco 23 | 20 | Bgl2 2.4 | 3.3 | PstI 1.25 kb |
| npi288 | 5L094 | Data from Paul Sisco. | ||||
| npi291 | 9L115 | Bgl2 3.3 | Bgl2 3.1 | Sst 8.8, 4.9 | Sst 8.4, 4.5 | 1.15 kb PstI insert. |
| npi297 | 2L091 | EcoRI >23.1 kb,14.8 kb | 11.7 kb,7.6 kb | 920 bp PstI | ||
| npi298 | 2L147 | Bgl2 6.2 | 14 | Bgl2 11.5 | 6.1 | B-A 2L confirmed.0.66 kb Pst I insert. |
| npi306 | 10L073 | Eco 7.9 | 9.4 | Bgl1 11 | Bgl1 24 | Near 17.02, 0.84 kb insert cut out with EcoRI+HindIII. First family 16 June '87 |
| npi340A | 6S002 | EcoRI 15.0 kb | 17.5 kb | BglII 10.0 kb | 6.0 kb | Supposed to be 2S (no linkage) & 2 other loci; 1.0 kb PstI; this data near umc85 |
| npi350 | 10L098 | Data from Paul Sisco. | ||||
| npi361A | 2L202 | EcoRI no allele | 13 kb | Probable Transposable Element. 10/17/90 | ||
| npi361B | 7S020 | EcoRI 7.8 kb | no allele | Probable Transposable Element. 10/17/90 | ||
| npi361C | 6L038 | EcoRI no allele | 3.3 kb | Probable Transposable Element. 10/17/90 | ||
| npi361D | 2L169 | EcoRI no allele | 2.8 kb | Probable Transposable Element. 10/17/90 | ||
| npi361E | 7S025 | EcoRI no allele | 17.5 kb | Probable Transposable Element. 10/17/90 | ||
| npi361F | 8L022 | EcoRI 15.6 kb | no allele | Probable Transposable Element. 10/17/90 | ||
| npi361I | 1L167 | EcoRI 3.75 kb | no allele | Probable Transposable Element. 10/17/90 | ||
| npi361J | 4S016 | EcoRI 3.45 kb | no allele | Probable Transposable Element. 10/17/90 | ||
| npi361K | 2L169 | EcoRI 2.85 kb | no allele | Probable Transposable Element. 10/17/90 | ||
| npi373 | 6L018 | BamHI | Data from Paul Sisco. 12/14/90 | |||
| npi400 | 7S012 | Bgl2 13 | 9.6 | Bgl2 9.6 | 10.5 | |
| npi400B | 2L196 | Data from Paul Sisco; linked with "pio200075"(now bnl17.14) and pio200581B | ||||
| npi403 | 9L112 | Eco 7.7 | Eco 12.5 | 0.75 kb PstI insert. | ||
| npi404 | 1S001 | Eco 16 | Eco 24 | 2nd locus probed by npi403 | ||
| npi409 | 5S-30 | Eco 6.7 | 5.2 | Eco 5.75 | 5.3 | 0.71 kb Pst I insert. |
| npi411 | 1S005 | Bam 2.5 | 7.2 | Bam 4.4 | 7.3 | 0.98 kb Pst I insert; Veronique estimates 1.2 kb. |
| npi414 | 8L097 | Bam 12 | 5.2, 4.4 | 0.87 kb Pst I insert. | ||
| npi421A | 2S027 | Hin3 6.0 | Hin3 7.4 | Bgl1 17.5 kb | Bgl13.4 kb | This is one of two bands recognized by this probe; B-A 2S confirmedPstI 500 bp |
| npi421B | 10L085 | Bgl2 ~11 | 2.2 | Bgl11.98 kb | 2.7kb | Second band probed w/npi421 insert. 2F don't have parents' polymorph.PstI 500 bp |
| npi425 | 3L158 | Bam 3.7 | 3.45 | Bgl2 5.7 | 8.6 | 1.0 kb Pst I insert. |
| npi427 | 9L096 | Bam 4.8 | Bam 4.5 | Bam 15, 4.9 | Bam 13, 6.6 | 0.66 kb PstI insert. |
| npi438 | 8L108 | EcoRI 12.6 kb | 9.0 kb | EcoRI9.1 kb | 16.4 kb | 910 bp PstI. 1/18/91 |
| npi443 | 9L101 | Bgl2 4.0, 2.3 | Bgl2 3.4, 2.5 | |||
| npi445B | 10S025 | EcoRI 6.5 +/or 5.85 kb | 4.0kb | BamHI 3.15 kb | 2.75 kb | 1.02 kb PstI, Supposed to be 5 near centromere. |
| npi446 | 3S054 | BamHI | HindIII | Data from Paul Sisco. 1/14/91 | ||
| npi451 | 4L161 | Bgl2 5.6 | 6.8 | Eco >25 | 19 | B-A 4L confirmed.0.62 kb Pst I insert. |
| npi456 | 2L111 | Bgl2 22.5 | 10.5 | Bgl2 10.5 | 7.3 | B-A 2L confirmed, not 2S.1.31 kb Pst I insert. |
| npi553 | 3L066 | Data from Paul Sisco.Near 8.35. | ||||
| npiB1 | 2S077 | BglII 11.5 kb | 4.8 kb | BglII 7.1 kb | 5.3 kb | 800 bp EcoRI + HindIII |
| o2 | 7S016 | Eco 5.9 | Eco 6.7 | Bgl 7.0 | Bgl 8.5 | probe is pXho0.9 from R. Schmidt |
| orp1 | 4L076 | Data from Karen Cone.trpB probe | ||||
| orp2 | 10S024 | Data from Karen Cone.trpB probe | ||||
| p1 | 1S026 | - | + | - | + | morphological |
| pcr1 | 1L103 | EcoRI 7.2 kb | 6.0 kb | 1.32 kb Eco from OR1 cDNA for protochlorophyllide reductase from S. Kay. 12/14/90 | ||
| pcr2 | 5S009 | EcoRI 4.9 kb | 4.2 kb | EcoRI 6.8 kb | 5.0 kb | Probe is EcoRI cut OR1 (1.32 kb) protochlorophyllide reductase cDNA of Steve Kay. 12/14/90 |
| pcr3 | 2S008 | EcoRI >23.1 kb | 21.5 kb | EcoRI 16.5 kb | 23.1 & 17.6 kb | 1.32 kb Eco from OR1 cDNA protochlorophyllide reductase of Steve Kay. 12/14/90 |
| pcr4 | 7S021 | EcoRI 14.3 + 13 kb | 11 kb | Fourth locus probed by protochlorophyllide reductase clone, OR1 from Steve Kay. Dec. 90 | ||
| pgd1 | 6L013 | 2 | 3.8 | isozyme | ||
| pgd2 | 3L071 | 5 | 2.8 | isozyme | ||
| pge2 | 8L004 | Near mdh1; data from Brenda Lowe, transposed Spm. | ||||
| pge3 | 7L072 | Transposed Spm, data of Brenda Lowe, on top of pio200563 | ||||
| pge14.1 | 4L112 | BamHI 14 kb + 10 kb | 11 kb | Data from Brenda Lowe, transposed Spm, probe = 14.1 | ||
| pge132 | 1S-24 | Data from Brenda Lowe.Kn1 homeodomain homologous sequence. First family only. | ||||
| pgeA4 | 8L042 | Brenda Lowe: Kn1 homeodomain homologous sequence. Between 2.369 and 12.30. | ||||
| pgeB5 | 5S005 | Brenda Lowe: Kn1 homeodomain homologous sequence. Vicinity of niu2 and bnl7.56. | ||||
| pgeC2 | 1L127 | Brenda Lowe: Kn1 homeodomain probed sequence.Same as Kn1? | ||||
| pgm2 | 5S000 | 3 | 4 | 3 | 4 | isozyme; supplimentary data from Oliver Nelson. |
| phi1 | 1L140 | 5 | 4 | 2 | 4 | isozyme |
| php1 | 10S023 | Chloroplast phosphoprotein polymorphic in second family.Data of J. Bennett | ||||
| phy1 | 1L125 | Bgl2 7.7 | 15 | Bgl2 16 | 7.7 | Probe is 1.5 kb Hind3-EcoR fragment from rice phytochrome cDNA pcPhy101, S.A.Kay |
| phy2 | 5S-04 | Bgl2 4.5 | 4.9 | Bam | same probe as phy1 | |
| pio060005 | 10S024 | BglII 12.7 kb | 20.5 kb | BglII 13 kb | 21.8 kb | 330 bp PstI |
| pio060007 | 6L023 | Eco 7.8 or 10 | Eco 11.5 | 350 bp PstI.Tx gave two different kinds of bands - same w/ Bgl2. 28 Nov 90, see pio book 9-5-89 | ||
| pio100005 | 9S018 | BglII 13.7 kb,5.45 kb | 12.5 kb,7.2 kb | BglII 22 kb,7.55 kb | 14.1 kb,5.8 kb | 825 bp PstI |
| pio100017 | 5L102 | EcoRI 23.1 kb | 15.5 kb | EcoRI 9.4 kb | 18 kb | 465 bp PstI |
| pio100080 | 3L144 | BamHI 16.7 kb,13.3 kb | 8.8 kb | EcoRI 15 kb | 18.5 kb | 485 bp PstI |
| pio200026 | 3L101 | BglII 15 kb | 8.4 kb | 12/14/90 | ||
| pio200045 | 6L022 | BglII 13.6 kb | 11.2 kb | 1.43 kb PstI. 1/18/91 | ||
| pio200075A | 10S-03 | BglII 4.2 kb | 4.6 kb | BglII 4.6 kb | 7.4 kb | 1.40 kb PstI. 1/18/91 |
| pio200075B | 9L060 | BglII 2.6 kb | 3.0 kb | 1.40 kb PstI, Minor band. | ||
| pio200523 | 7L109 | BglII 8.3 kb | 11.5 kb | BglII 9.5 kb | 8.6 kb | 12/14/90 |
| pio200563 | 7L072 | BamHI 2.22 kb | 5.5 kb | EcoRI 18.7 kb | 13.5 kb | 1.15 kb PstI, Dave Grant mapped to 4L terminal. |
| pio200569A | 7L050 | BglII 6.1 kb | 6.6 kb | 1.72 kb PstI, Major band, Supposed to be 7S; weak linkage to 4.24 on 7L. | ||
| pio200569B | 2L130 | BglII 5.25 kb | 3.75 kb | BglII 5.1 kb | 5.65 kb | 1.72 kb PstI, Minor band, probed by pio200569.Weak linkage with umc5A on 2L. |
| pio200581A | 7S000 | EcoRI 6.3 kb | 22.0 kb | EcoRI 16.7 kb | 9.2 kb | 1.40 kb PstI, Lower band |
| pio200581B | 2L194 | EcoRI 14.5 kb | >23.1 kb | EcoRI >23.1 kb | 19.3 kb | 1.40 kb PstI, Upper band, second band probed by pio200581; linked w/ "pio200075" |
| pio200599 | 6L111 | BamHI 4.85 kb | 4.2 kb | EcoRI 23.4 kb | 14.5 kb | 1.65 kb PstI |
| pio200626 | 10S-12 | BglII 18.3 kb | 8.5 kb | EcoRI >23.1 kb | 18.7 kb | 1.40 kb PstI |
| pio200690A | 7L107 | BamHI No band | 18 kb | BamHI 5.05 kb | 7.3 kb | 1.43 kb PstI |
| pio200690B | 7S026 | BamHI 15 kb | No band | BamHI No band | 15 kb | 1.43 kb PstI |
| pio200713 | 4S031 | BamHI 11.5 kb | 4.15 kb | BamHI 16.7 kb | 10.6kb,4.9 kb | 1.47 kb PstI |
| pio200725 | 4S030 | BamHI 11.5 kb | 4.3 kb | BamHI 16.5 kb | 11 kb,4.9 kb | 1.74 PstI |
| pio200726 | 3L161 | BglII >23.1 kb | 20 kb,8 kb | BglII 7.5 kb | 9.3 kb | 1.20 kb PstI |
| pio200728 | 7L130 | BglII 17.0 kb | 13.1 kb | EcoRI 6.8 kb | 7.2 kb | 1.80 kb PstI |
| pKlamb+ | 3L068 | Data from Paul Sisco.Combined with abp1 where consistant. | ||||
| pl1 | 6L049 | Hind III9.7 kb | 18.0 kb | + | - | probe is H3-Sal O.6 from K.C. Cone, morphological in 2nd family |
| r1 | 10L061 | Bgl II 10.3 kb | 13.5 kb,8.4 kb | Probe is R5-4 frag.2. | ||
| rab17 | 6L074 | EcoRI 11.72 kb | 4.95 kb | EcoRI 9.1 kb | 5.2 kb | 400 bp Pst cDNA frag from M. Pages. Recognizes the same frag's as rny1. 10/16/90 |
| rab30 | 1S-16 | BglII 3.35 kb | 2.5 kb | EcoRI 11.2 kb + 5.8 kb | 4.7 kb | 400 bp Hind3/EcoRI cDNA frag from M. Pages. Eileen thinks closer to 560 bp. 10/16/90 |
| rny1 | 6L074 | Sst 9.3 | Sst 19.5 | Bam 8.5 | Bam 9.6 | Probe is rice rab25 cDNA from J. Mundy.Homologous with rab17 (M. Pages)? |
| sh1 | 9S029 | Hinc2 ~5 | ~ 3 | Bgl1 ~14 | ~6 | probe is Pst38 or Pvu55 |
| sh2 | 3L149 | BamHI 10.5 & 9.5 kb | 11.0 & 8.0 kb | BamHI 8 & 5.6 kb | 10.4 & 4.8 kb | 1050 bp Eco. cDNA clone sh2 1050 from Curt Hannah. 1/22/91 |
| stAc | 10L030 | BglII 5.85 kb | 5.55 kb | 600 bp H3-Xba fragment flanking Stabilized Ac, Paul Chomet | ||
| sus1 | 9L084 | Bam ~11 | ~6 | Same as Css1, probe is pshD13 from P. Chourey; B-A on 9L | ||
| tpi4 | 3S061 | 4 | N | isozyme | ||
| trAc9705 | 1S-03 | Data of Diane Burgess, DNAP. | ||||
| umc3 | 3L119 | HindIII | HindIII | Data from Paul Sisco. 12/14/90 | ||
| umc5A | 2L122 | Data from Paul Sisco.Loosely linked with dia1. | ||||
| umc5B | 7L036 | Data from Paul Sisco. | ||||
| umc15 | 4L120 | BglII 11.25 kb | 9.5 kb | 750 bp PstI. Tx alleles are 24.5 kb & 6.65 kb in RI Family. No poly in 2F. 1/14/91 | ||
| umc19 | 4L137 | BglII 11.7 kb | 22.5 kb | EcoRI >23.1 kb | 18.5 kb | 670 bp |
| umc23 | 1L086 | Data from Paul Sisco. 670 bp. | ||||
| umc31A | 4S040 | Data from Paul Sisco. 550 bp.; A second locus on 2L. | ||||
| umc31B | 2L157 | Data from Paul Sisco, near npi298 | ||||
| umc32A | 3S011 | data from Paul Sisco | ||||
| umc32B | 8L008 | Data from Paul Sisco. | ||||
| umc33 | 1L088 | Data from Paul Sisco. | ||||
| umc35 | 7L137 | EcoRI 16.5 kb | 13.9 kb | 650 bp, PstI | ||
| umc37 | 1L103 | Data from Paul Sisco. | ||||
| umc39 | 3L121 | EcoRV | Data from Paul Sisco. 12/14/90 | |||
| umc42A | 4S068 | BamHI 7.0 kb | 21.8 kb | 640 bp.Data for first family probe a locus on 3L. | ||
| umc42B | 3S062 | BamHI 14.9 kb | 10.5 kb | 640 bp.Second locus probed with umc42A (4L). Poor data;linked with 6.06 & pdg2 | ||
| umc43 | 5S016 | Data from Paul Sisco | ||||
| umc44A | 10L055 | Data from Paul Sisco. | ||||
| umc44B | 2S041 | Data from Paul Sisco | ||||
| umc47 | 4S070 | BglII 5.9 kb | 11.5 kb | 740 bp | ||
| umc48 | 8L052 | Data from Paul Sisco. | ||||
| umc49 | 2L167 | Data from Paul Sisco | ||||
| umc50 | 3S058 | Data from Paul Sisco. | ||||
| umc51 | 5L075 | Data form Paul Sisco. | ||||
| umc52 | 4L113 | HindIII | Data from Paul Sisco. 12/14/90 | |||
| umc53 | 2S023 | data from Paul Sisco | ||||
| umc54 | 5L069 | Data from Paul Sisco. | ||||
| umc58 | 1L068 | HindIII | HindIII | Data from Paul Sisco. 12/14/90 | ||
| umc59 | 6L017 | BamHI 12.8 kb | 10.0 kb | BamHI 5.7 kb | 10.7 kb | 930 bp. Tx allele for progeny is 15.7 kb instead of 5.7 kb |
| umc60 | 3L073 | Data from Pau Sisco. | ||||
| umc61 | 2S050 | BglII 7.3 kb | 8.5 kb | BglII 9.4 kb | 14 kb | Original data from Paul Sisco, near B1. 1.28 kb PstI. |
| umc64 | 10L029 | BamHI | Data from Paul Sisco. 12/14/90 | |||
| umc65L | 6L042 | Bgl2 4.1 | Bgl2 7.7 | 0.65 kb PstI insert | ||
| umc66A | 5S-13 | EcoRI 5.85 kb | 10 kb | EcoRI 9.0 kb | 6.1 kb | 1020 bp, Major band, supposed to be on 4S; loose linkage w/ 8.29B on 5S;.5kb2/88. 1F redone 10/16/90 |
| umc66B | 1L135 | EcoRI 4.85 kb | 5.1 kb | EcoRI 5.2 kb | 5.6 kb | 1020 bp, Minor band, probed by umc66.Loose linkage w/ phy1 on 1L in 2nd family. 1F redone 10/16/90 |
| umc72A | 5S-02 | BamHI | Data from Paul Sisco. 12/14/90 | |||
| umc72B | 1L129 | EcoRV | Data from Paul Sisco. 12/14/90 | |||
| umc84 | 1L170 | HindIII | Data from Paul Sisco. 12/14/90 | |||
| umc85 | 6S001 | Data from Paul Sisco. | ||||
| umc95 | 9L089 | BglII 2.9 kb | 2.25 kb | EcoRI 19.5 kb | 8.1 kb | 680 bp |
| umc106 | 1L126 | HindIII | HindIII,EcoRI,Bam | Data from Paul Sisco. 770 bp. 12/14/90 | ||
| umc119 | 1L066 | HindIII | HindIII | Data from Paul Sisco. 12/14/90 | ||
| umc122 | 2L145 | Data from Paul Sisco | ||||
| umc128 | 1L102 | Data from Paul Sisco. | ||||
| umc130 | 10S021 | Data from Paul Sisco. | ||||
| umc135 | 2L108 | BamHI | Data from Paul Sisco. 12/14/90 | |||
| umc147A | 5S-10 | HindIII | Data from Paul Sisco. 12/14/90 | |||
| umc147B | 1L136 | HindIII | Data from Paul Sisco. 12/14/90 | |||
| umc153 | 9L072 | Data from Paul Sisco. 12/14/90 | ||||
| umc154 | 3S057 | EcoRV | Data from Paul Sisco. 12/14/90 | |||
| umc155 | 10S023 | EcoRI | Data from Paul Sisco. 12/14/90 | |||
| umc156 | 4S071 | EcoRI | Data from Paul Sisco. 12/14/90 | |||
| umc157 | 1S-15 | BamHI | EcoRV | Data from Paul Sisco. 12/14/90 | ||
| umc158 | 4L109 | EcoRV | EcoRV | Data from Paul Sisco. 12/14/90 | ||
| umc175 | 3L066 | EcoRV | Data from Paul Sisco. 12/14/90 | |||
| vp1 | 3L076 | Bgl2 4.3 | Bgl2 4.75 | Hinc2 4.5 | Hinc2 5.1 | probe is 0.7 kb Pst of pVPM1B from D. McCarty |
| wx1 | 9S056 | Bam 5.0, 3.3 | 4.8 | Bam 13, 4.7 | 4.9. 4.8 | probe is pBF225 |
| ynh-me1 | 3S040 | NADP-dependent malic enzyme, chloroplastic leaf form; data of Beverly Rothermel | ||||
| ynh20 | 1L120 | Hin3 5.9 | Hin3 9.4 | probe is pBMP-TA69R 1 kb H3-Xho from J. Chen | ||
| ynh21 | 1S027 | Bam>25 | Bam 15, 6.7 | Bam >25 | Bam 15, 6.7 | probe is pX.5-2 0.4 kb Sst from J. Chen |
| zp15 | 6L012 | Bam9.4kb | 12.5 | probe is Eco-H3 insert from pGEMZ14 (Pederson, JBC 261, 6279) | ||
| zpB36 | 7L032 | Eco ~12, 8 | ~11 | Eco ~12 | ~16 | zein probe |
| zpL1a | 4S029 | 18 | 20.5 | Zein IEF bands from C. Wilson. | ||
| zpL1b | 4S031 | 36 | 29.5 | Zein IEF bands from C Wilson. | ||
| zpL1c | 4S031 | 32 | 31.5 | Zein IEF bands from C. Wilson. | ||
| zpL1d | 4S034 | 33.5 dark | 33.5 light | Zein IEF bands from C. Wilson. | ||
| zpL1e | 4S030 | 18, 60 | 17.5 | Zein IEF bands from C. Wilson.; Same as zpL1g. | ||
| zpL1f | 4S033 | 32, 36 | 35 | Zein IEF bands from C. Wilson. | ||
| zpL2b | 7S021 | 38 | 21.5, 53 | Zein IEF bands from C. Wilson. |
3) through 6) the restriction enzyme showing polymorphism and size of the fragment(s) detected segregating with that locus in each of the parental inbreds where known
7) comments on size of the insert, information about the clone and who contributed mapping information
Map positions have negative values where the loci appear to lie distal to 0 on the conventional map.
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